Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473813: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320481' containing sample 'TB_RSA56' from individual '11127/31'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 575.3Mb downloads

UUID: 0e1a160d-9bb2-4b3b-a485-319f44babdf7

Design: Illumina sequencing of Mycobacterium tuberculosis TB_RSA56 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - MRC SA

PRJNA228050 • SRP036981 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TB_RSA56

SAMN02403497 • SRS555332 • All experiments • All runs

Organism: Mycobacterium tuberculosis TB_RSA56

Library:

Name: Pond-320481

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 453863.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5819A

material_type: DNA:DNA Somatic

product_order: PDO-2551

product_part_number: P-MCV-0001

project: G54460

research_project: RP-114

root_sample_id: SM-4PMPT

sample_id: SM-5819A

work_request: 39310

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 13:50:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 575.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173419	2,565,868	518.3M	287Mb	2014-02-20
SRR1173808	2,574,785	520.1M	288.3Mb	2014-02-20

ID:: 654303

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity